Oh, man. Those rangers have great answers for everything, don't they?
I've actually researched the topic of wildlife and dogs for both my thesis and the work I do now. Results vary a bit, but in general, wildlife do not suffer ill effects from dogs, even deer that are chased by dogs for up to 4 miles (if anyone is interested I can provide the references). Also, studies on disturbance effects (ie flight, alert behavior) of wildlife to dogs vs. humans are inconclusive. Some species in some areas react to dogs LESS than to people. Basically there is no evidence that even a badly controlled, wildlife-chasing dog would effect survival and reproduction of MOST species of wildlife found in California. As with anything, there are exceptions.
As to bites from pitbull, what about kicks from horses, or having to deal with trail erosion and poop from them. I've hiked trails with mule trains and extensive horse use (yes, with my dogs). It's not pretty.
The biggest stressors for wildlife in PARKS (habitat loss is first outside of parks) are:
#1. Off (and on) road vehicles including ATVs, snowmobiles and snowcoaches. Direct mortality, habitat avoidance, and behavioral consequences leading to stress all contribute to increased mortality and decreased reproductive success. The associated mechanized noises are also a huge issue.
#2. Human presence and human actions. People are dumb. They sometimes like to put their children near grizzlies for a photo, or harass rutting elk
http://www.nps.gov/yell/naturescience/elk.htm, or chase animals down for a picture. VERY stressful. And the saying a fed bear is a dead bear is very true. Also, humans nearly wiped out every large mammal in North America by the early 1900s by hunting, mainly with the modern rifle. Dogs did not.
#3. Park management actions. For years bison and elk were intensely managed in Yellowstone, keeping populations artificially low. This is just one example. Wildlife management is a tricky subject. Long term wildife monitoring, and determining cause-effect of behavioral observations is also extremely difficult.
A dog on a leash, or a voice controlled dog, with an owner who buries or removes the feces (same methods as with human waste in the backcountry) very likely causes significantly less wildife effects than (especially a large group of loud), humans.
Off road vehicles, as I've said, are still allowed in some National Parks, but dogs are banned from all but the roads in most parks.
Yeah, OK, so I got a ticket for running with my dog at Chiricahua. It was far too hot to leave him, and you can't leave dogs unattended anyway. Except for Acadia, I don't visit National Parks anymore. There are some very nice National Forests and state parks (in places other than California) that do allow dogs on trails, and even off leash.
Interesting topic. I just don't like ill-informed assumptions about dogs and wildlife. Such assumptions are not supported by the literature.
I have dogs in large part to enjoy hiking and trail running with them. It's frustrating that some of the most beautiful areas of the country are completely off limits.